Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQB2P05538 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 AL034346.1-201ENST00000568244 1277 ntBASIC21.84■■□□□ 1.09
HLA-DQB2P05538 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.84■■□□□ 1.09
HLA-DQB2P05538 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.83■■□□□ 1.09
HLA-DQB2P05538 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQB2P05538 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
HLA-DQB2P05538 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.83■■□□□ 1.09
HLA-DQB2P05538 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQB2P05538 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQB2P05538 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQB2P05538 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQB2P05538 AC010542.4-201ENST00000563151 1910 ntBASIC21.82■■□□□ 1.08
HLA-DQB2P05538 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 AC012414.1-201ENST00000556676 535 ntBASIC21.82■■□□□ 1.08
HLA-DQB2P05538 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.82■■□□□ 1.08
HLA-DQB2P05538 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQB2P05538 FBXW4P1-201ENST00000426721 2239 ntBASIC21.82■■□□□ 1.08
HLA-DQB2P05538 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 IRS3P-201ENST00000223076 1006 ntBASIC21.81■■□□□ 1.08
HLA-DQB2P05538 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
HLA-DQB2P05538 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQB2P05538 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 ZNRF2P3-201ENST00000424200 374 ntBASIC21.79■■□□□ 1.08
HLA-DQB2P05538 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 MIR6084-201ENST00000622012 110 ntBASIC21.79■■□□□ 1.08
HLA-DQB2P05538 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQB2P05538 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.78■■□□□ 1.08
HLA-DQB2P05538 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 AL354811.1-201ENST00000610286 706 ntBASIC21.78■■□□□ 1.08
HLA-DQB2P05538 AP006587.3-201ENST00000525742 1516 ntBASIC21.78■■□□□ 1.08
HLA-DQB2P05538 BX005040.4-201ENST00000637145 1518 ntBASIC21.78■■□□□ 1.08
HLA-DQB2P05538 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DQB2P05538 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms