Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL1A1P02452 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
COL1A1P02452 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.07■■□□□ 1.76
COL1A1P02452 GPX1P1-201ENST00000388829 606 ntBASIC26.07■■□□□ 1.76
COL1A1P02452 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
COL1A1P02452 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.07■■□□□ 1.76
COL1A1P02452 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL1A1P02452 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
COL1A1P02452 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.06■■□□□ 1.76
COL1A1P02452 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A1P02452 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
COL1A1P02452 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.06■■□□□ 1.76
COL1A1P02452 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.05■■□□□ 1.76
COL1A1P02452 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.05■■□□□ 1.76
COL1A1P02452 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 AC139530.1-201ENST00000575312 1977 ntBASIC26.05■■□□□ 1.76
COL1A1P02452 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL1A1P02452 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.04■■□□□ 1.76
COL1A1P02452 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL1A1P02452 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
COL1A1P02452 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL1A1P02452 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL1A1P02452 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL1A1P02452 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.04■■□□□ 1.76
COL1A1P02452 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.04■■□□□ 1.76
COL1A1P02452 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A1P02452 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.03■■□□□ 1.76
COL1A1P02452 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A1P02452 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A1P02452 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A1P02452 C9orf163-202ENST00000624034 2573 ntBASIC26.03■■□□□ 1.76
COL1A1P02452 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.03■■□□□ 1.76
COL1A1P02452 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL1A1P02452 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.03■■□□□ 1.76
COL1A1P02452 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
COL1A1P02452 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.03■■□□□ 1.76
COL1A1P02452 AL050303.2-201ENST00000619798 666 ntBASIC26.03■■□□□ 1.76
COL1A1P02452 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.02■■□□□ 1.76
COL1A1P02452 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL1A1P02452 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.02■■□□□ 1.76
COL1A1P02452 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
COL1A1P02452 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.02■■□□□ 1.76
COL1A1P02452 AC010141.2-201ENST00000452426 721 ntBASIC26.02■■□□□ 1.76
COL1A1P02452 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.02■■□□□ 1.76
COL1A1P02452 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL1A1P02452 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.02■■□□□ 1.76
COL1A1P02452 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.02■■□□□ 1.76
COL1A1P02452 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
COL1A1P02452 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.01■■□□□ 1.75
COL1A1P02452 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
COL1A1P02452 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.01■■□□□ 1.75
COL1A1P02452 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL1A1P02452 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.01■■□□□ 1.75
COL1A1P02452 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.01■■□□□ 1.75
COL1A1P02452 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL1A1P02452 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL1A1P02452 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26■■□□□ 1.75
COL1A1P02452 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26■■□□□ 1.75
COL1A1P02452 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL1A1P02452 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
COL1A1P02452 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26■■□□□ 1.75
COL1A1P02452 AL034346.1-201ENST00000568244 1277 ntBASIC26■■□□□ 1.75
COL1A1P02452 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26■■□□□ 1.75
COL1A1P02452 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26■■□□□ 1.75
COL1A1P02452 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL1A1P02452 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26■■□□□ 1.75
COL1A1P02452 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.99■■□□□ 1.75
COL1A1P02452 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
COL1A1P02452 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.99■■□□□ 1.75
COL1A1P02452 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.99■■□□□ 1.75
COL1A1P02452 CD99P1-205ENST00000527459 561 ntBASIC25.99■■□□□ 1.75
COL1A1P02452 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.99■■□□□ 1.75
COL1A1P02452 AP001160.3-201ENST00000601484 763 ntBASIC25.99■■□□□ 1.75
COL1A1P02452 AL121832.2-201ENST00000610979 668 ntBASIC25.99■■□□□ 1.75
COL1A1P02452 AC231657.2-201ENST00000624556 255 ntBASIC25.99■■□□□ 1.75
COL1A1P02452 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms