Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
TSPAN3O60637 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.14■■□□□ 1.14
TSPAN3O60637 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.14■■□□□ 1.13
TSPAN3O60637 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
TSPAN3O60637 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.14■■□□□ 1.13
TSPAN3O60637 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.14■■□□□ 1.13
TSPAN3O60637 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.14■■□□□ 1.13
TSPAN3O60637 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.14■■□□□ 1.13
TSPAN3O60637 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TSPAN3O60637 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TSPAN3O60637 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TSPAN3O60637 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TSPAN3O60637 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TSPAN3O60637 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.13■■□□□ 1.13
TSPAN3O60637 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TSPAN3O60637 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 AC080038.3-201ENST00000623346 1952 ntBASIC22.13■■□□□ 1.13
TSPAN3O60637 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.13■■□□□ 1.13
TSPAN3O60637 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.13■■□□□ 1.13
TSPAN3O60637 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.13■■□□□ 1.13
TSPAN3O60637 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.13■■□□□ 1.13
TSPAN3O60637 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSPAN3O60637 AC055733.4-201ENST00000638462 1354 ntBASIC22.12■■□□□ 1.13
TSPAN3O60637 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TSPAN3O60637 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TSPAN3O60637 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.12■■□□□ 1.13
TSPAN3O60637 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.12■■□□□ 1.13
TSPAN3O60637 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.12■■□□□ 1.13
TSPAN3O60637 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.12■■□□□ 1.13
TSPAN3O60637 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TSPAN3O60637 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 ESRRAP2-201ENST00000418437 1549 ntBASIC22.11■■□□□ 1.13
TSPAN3O60637 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TSPAN3O60637 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.11■■□□□ 1.13
TSPAN3O60637 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.11■■□□□ 1.13
TSPAN3O60637 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.11■■□□□ 1.13
TSPAN3O60637 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.11■■□□□ 1.13
TSPAN3O60637 AC133561.1-201ENST00000568600 2415 ntBASIC22.11■■□□□ 1.13
TSPAN3O60637 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TSPAN3O60637 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.1■■□□□ 1.13
TSPAN3O60637 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.1■■□□□ 1.13
TSPAN3O60637 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.1■■□□□ 1.13
TSPAN3O60637 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 AC137761.2-201ENST00000561729 223 ntBASIC22.1■■□□□ 1.13
TSPAN3O60637 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.1■■□□□ 1.13
TSPAN3O60637 AC145350.3-201ENST00000569033 163 ntBASIC22.1■■□□□ 1.13
TSPAN3O60637 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.1■■□□□ 1.13
TSPAN3O60637 RARRES2P11-201ENST00000635158 484 ntBASIC22.1■■□□□ 1.13
TSPAN3O60637 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN3O60637 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
TSPAN3O60637 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.09■■□□□ 1.13
TSPAN3O60637 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TSPAN3O60637 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.09■■□□□ 1.13
TSPAN3O60637 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.09■■□□□ 1.13
TSPAN3O60637 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.09■■□□□ 1.13
TSPAN3O60637 AL034346.1-201ENST00000568244 1277 ntBASIC22.09■■□□□ 1.13
TSPAN3O60637 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN3O60637 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.08■■□□□ 1.13
TSPAN3O60637 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TSPAN3O60637 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TSPAN3O60637 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TSPAN3O60637 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TSPAN3O60637 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
TSPAN3O60637 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.08■■□□□ 1.13
TSPAN3O60637 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.08■■□□□ 1.13
TSPAN3O60637 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms