Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.41■□□□□ 0.7
ZIC3O60481 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC3O60481 AC242852.2-201ENST00000615738 1807 ntBASIC19.41■□□□□ 0.7
ZIC3O60481 AC012676.1-201ENST00000574705 1949 ntBASIC19.41■□□□□ 0.7
ZIC3O60481 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.4■□□□□ 0.7
ZIC3O60481 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.4■□□□□ 0.7
ZIC3O60481 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.4■□□□□ 0.7
ZIC3O60481 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.4■□□□□ 0.7
ZIC3O60481 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.4■□□□□ 0.7
ZIC3O60481 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.4■□□□□ 0.7
ZIC3O60481 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC3O60481 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
ZIC3O60481 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZIC3O60481 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZIC3O60481 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.39■□□□□ 0.69
ZIC3O60481 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.39■□□□□ 0.69
ZIC3O60481 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZIC3O60481 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.39■□□□□ 0.69
ZIC3O60481 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC3O60481 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC3O60481 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC3O60481 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.38■□□□□ 0.69
ZIC3O60481 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC3O60481 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.38■□□□□ 0.69
ZIC3O60481 AC079140.4-201ENST00000507448 529 ntBASIC19.38■□□□□ 0.69
ZIC3O60481 AP004607.4-201ENST00000530158 1459 ntBASIC19.38■□□□□ 0.69
ZIC3O60481 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.38■□□□□ 0.69
ZIC3O60481 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC3O60481 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZIC3O60481 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZIC3O60481 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 AP006587.3-201ENST00000525742 1516 ntBASIC19.37■□□□□ 0.69
ZIC3O60481 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.37■□□□□ 0.69
ZIC3O60481 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.37■□□□□ 0.69
ZIC3O60481 KRT18P61-201ENST00000585825 1298 ntBASIC19.37■□□□□ 0.69
ZIC3O60481 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.37■□□□□ 0.69
ZIC3O60481 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZIC3O60481 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.37■□□□□ 0.69
ZIC3O60481 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.37■□□□□ 0.69
ZIC3O60481 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.36■□□□□ 0.69
ZIC3O60481 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ZIC3O60481 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.36■□□□□ 0.69
ZIC3O60481 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.36■□□□□ 0.69
ZIC3O60481 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.36■□□□□ 0.69
ZIC3O60481 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.36■□□□□ 0.69
ZIC3O60481 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.36■□□□□ 0.69
ZIC3O60481 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZIC3O60481 AC004854.2-201ENST00000608450 1441 ntBASIC19.35■□□□□ 0.69
ZIC3O60481 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZIC3O60481 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZIC3O60481 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZIC3O60481 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.35■□□□□ 0.69
ZIC3O60481 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.35■□□□□ 0.69
ZIC3O60481 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.35■□□□□ 0.69
ZIC3O60481 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.35■□□□□ 0.69
ZIC3O60481 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms