Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.47■□□□□ 0.39
SSSCA1O60232 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.47■□□□□ 0.39
SSSCA1O60232 DUX4L4-201ENST00000566884 1269 ntBASIC17.47■□□□□ 0.39
SSSCA1O60232 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.47■□□□□ 0.39
SSSCA1O60232 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.47■□□□□ 0.39
SSSCA1O60232 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSSCA1O60232 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSSCA1O60232 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.47■□□□□ 0.39
SSSCA1O60232 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SSSCA1O60232 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSSCA1O60232 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.46■□□□□ 0.39
SSSCA1O60232 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.46■□□□□ 0.39
SSSCA1O60232 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.46■□□□□ 0.39
SSSCA1O60232 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSSCA1O60232 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.46■□□□□ 0.39
SSSCA1O60232 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.46■□□□□ 0.39
SSSCA1O60232 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.46■□□□□ 0.39
SSSCA1O60232 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSSCA1O60232 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
SSSCA1O60232 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.45■□□□□ 0.38
SSSCA1O60232 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.45■□□□□ 0.38
SSSCA1O60232 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SSSCA1O60232 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.45■□□□□ 0.38
SSSCA1O60232 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSSCA1O60232 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SSSCA1O60232 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SSSCA1O60232 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSSCA1O60232 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.44■□□□□ 0.38
SSSCA1O60232 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSSCA1O60232 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 AC005703.6-201ENST00000623265 1329 ntBASIC17.44■□□□□ 0.38
SSSCA1O60232 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.44■□□□□ 0.38
SSSCA1O60232 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSSCA1O60232 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
SSSCA1O60232 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.43■□□□□ 0.38
SSSCA1O60232 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.43■□□□□ 0.38
SSSCA1O60232 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.43■□□□□ 0.38
SSSCA1O60232 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.43■□□□□ 0.38
SSSCA1O60232 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SSSCA1O60232 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSSCA1O60232 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SSSCA1O60232 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SSSCA1O60232 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SSSCA1O60232 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSSCA1O60232 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.42■□□□□ 0.38
SSSCA1O60232 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SSSCA1O60232 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.42■□□□□ 0.38
SSSCA1O60232 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.42■□□□□ 0.38
SSSCA1O60232 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.42■□□□□ 0.38
SSSCA1O60232 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.42■□□□□ 0.38
SSSCA1O60232 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SSSCA1O60232 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SSSCA1O60232 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms