Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.58■□□□□ 0.89
NDUFS4O43181 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
NDUFS4O43181 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.58■□□□□ 0.89
NDUFS4O43181 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFS4O43181 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.58■□□□□ 0.89
NDUFS4O43181 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.58■□□□□ 0.89
NDUFS4O43181 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.58■□□□□ 0.88
NDUFS4O43181 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFS4O43181 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.58■□□□□ 0.88
NDUFS4O43181 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFS4O43181 AP004607.7-201ENST00000527152 1677 ntBASIC20.58■□□□□ 0.88
NDUFS4O43181 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NDUFS4O43181 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.57■□□□□ 0.88
NDUFS4O43181 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.57■□□□□ 0.88
NDUFS4O43181 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NDUFS4O43181 MIR6084-201ENST00000622012 110 ntBASIC20.57■□□□□ 0.88
NDUFS4O43181 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.57■□□□□ 0.88
NDUFS4O43181 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFS4O43181 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.56■□□□□ 0.88
NDUFS4O43181 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NDUFS4O43181 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.56■□□□□ 0.88
NDUFS4O43181 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.56■□□□□ 0.88
NDUFS4O43181 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.56■□□□□ 0.88
NDUFS4O43181 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.56■□□□□ 0.88
NDUFS4O43181 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFS4O43181 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.55■□□□□ 0.88
NDUFS4O43181 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NDUFS4O43181 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFS4O43181 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFS4O43181 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NDUFS4O43181 AL034346.1-201ENST00000568244 1277 ntBASIC20.55■□□□□ 0.88
NDUFS4O43181 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFS4O43181 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.55■□□□□ 0.88
NDUFS4O43181 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFS4O43181 FAM99A-202ENST00000538190 1989 ntBASIC20.55■□□□□ 0.88
NDUFS4O43181 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFS4O43181 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
NDUFS4O43181 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NDUFS4O43181 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 LINC00565-201ENST00000562710 2331 ntBASIC20.54■□□□□ 0.88
NDUFS4O43181 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.54■□□□□ 0.88
NDUFS4O43181 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.54■□□□□ 0.88
NDUFS4O43181 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
NDUFS4O43181 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFS4O43181 BX005040.4-201ENST00000637145 1518 ntBASIC20.53■□□□□ 0.88
NDUFS4O43181 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.53■□□□□ 0.88
NDUFS4O43181 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NDUFS4O43181 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.53■□□□□ 0.88
NDUFS4O43181 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.53■□□□□ 0.88
NDUFS4O43181 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.53■□□□□ 0.88
NDUFS4O43181 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFS4O43181 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms