Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AP003733.4-201ENST00000623785 1697 ntBASIC20.26■□□□□ 0.83
RRP8O43159 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RRP8O43159 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.25■□□□□ 0.83
RRP8O43159 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.25■□□□□ 0.83
RRP8O43159 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RRP8O43159 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RRP8O43159 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RRP8O43159 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.25■□□□□ 0.83
RRP8O43159 AC010141.2-201ENST00000452426 721 ntBASIC20.25■□□□□ 0.83
RRP8O43159 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.25■□□□□ 0.83
RRP8O43159 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.25■□□□□ 0.83
RRP8O43159 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.25■□□□□ 0.83
RRP8O43159 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.25■□□□□ 0.83
RRP8O43159 AC006058.3-201ENST00000606217 1069 ntBASIC20.25■□□□□ 0.83
RRP8O43159 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.25■□□□□ 0.83
RRP8O43159 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RRP8O43159 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RRP8O43159 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RRP8O43159 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.25■□□□□ 0.83
RRP8O43159 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.24■□□□□ 0.83
RRP8O43159 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RRP8O43159 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.24■□□□□ 0.83
RRP8O43159 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.24■□□□□ 0.83
RRP8O43159 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.24■□□□□ 0.83
RRP8O43159 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.24■□□□□ 0.83
RRP8O43159 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.24■□□□□ 0.83
RRP8O43159 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.24■□□□□ 0.83
RRP8O43159 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.24■□□□□ 0.83
RRP8O43159 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.24■□□□□ 0.83
RRP8O43159 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RRP8O43159 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.24■□□□□ 0.83
RRP8O43159 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.23■□□□□ 0.83
RRP8O43159 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.23■□□□□ 0.83
RRP8O43159 UNC93B4-201ENST00000505679 747 ntBASIC20.23■□□□□ 0.83
RRP8O43159 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.23■□□□□ 0.83
RRP8O43159 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.23■□□□□ 0.83
RRP8O43159 AC068338.2-201ENST00000563278 1430 ntBASIC20.23■□□□□ 0.83
RRP8O43159 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.23■□□□□ 0.83
RRP8O43159 AC138907.5-202ENST00000569484 235 ntBASIC20.23■□□□□ 0.83
RRP8O43159 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RRP8O43159 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.22■□□□□ 0.83
RRP8O43159 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RRP8O43159 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RRP8O43159 AL512625.2-201ENST00000417533 625 ntBASIC20.22■□□□□ 0.83
RRP8O43159 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.22■□□□□ 0.83
RRP8O43159 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.22■□□□□ 0.83
RRP8O43159 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RRP8O43159 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RRP8O43159 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RRP8O43159 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.22■□□□□ 0.83
RRP8O43159 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
RRP8O43159 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RRP8O43159 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RRP8O43159 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RRP8O43159 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.21■□□□□ 0.83
RRP8O43159 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.21■□□□□ 0.83
RRP8O43159 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.21■□□□□ 0.83
RRP8O43159 BX276092.2-201ENST00000417668 665 ntBASIC20.21■□□□□ 0.83
RRP8O43159 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.21■□□□□ 0.83
RRP8O43159 AC128676.1-201ENST00000454392 318 ntBASIC20.21■□□□□ 0.83
RRP8O43159 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RRP8O43159 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RRP8O43159 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.21■□□□□ 0.83
RRP8O43159 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RRP8O43159 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RRP8O43159 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RRP8O43159 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RRP8O43159 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RRP8O43159 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.2■□□□□ 0.82
RRP8O43159 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.2■□□□□ 0.82
RRP8O43159 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.2■□□□□ 0.82
RRP8O43159 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.2■□□□□ 0.82
RRP8O43159 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.2■□□□□ 0.82
RRP8O43159 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.2■□□□□ 0.82
RRP8O43159 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RRP8O43159 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RRP8O43159 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.19■□□□□ 0.82
RRP8O43159 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.19■□□□□ 0.82
RRP8O43159 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 AC007322.4-201ENST00000509611 723 ntBASIC20.19■□□□□ 0.82
RRP8O43159 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.19■□□□□ 0.82
RRP8O43159 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.19■□□□□ 0.82
RRP8O43159 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.19■□□□□ 0.82
RRP8O43159 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms