Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN4O14493 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN4O14493 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN4O14493 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN4O14493 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN4O14493 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN4O14493 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN4O14493 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN4O14493 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN4O14493 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN4O14493 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 AL117328.2-201ENST00000624617 1940 ntBASIC20.21■□□□□ 0.83
CLDN4O14493 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN4O14493 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN4O14493 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLDN4O14493 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLDN4O14493 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLDN4O14493 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN4O14493 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLDN4O14493 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN4O14493 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN4O14493 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN4O14493 ECEL1P1-201ENST00000373592 1742 ntBASIC20.19■□□□□ 0.82
CLDN4O14493 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLDN4O14493 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN4O14493 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN4O14493 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
CLDN4O14493 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN4O14493 MIR6821-201ENST00000617625 74 ntBASIC20.19■□□□□ 0.82
CLDN4O14493 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.19■□□□□ 0.82
CLDN4O14493 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLDN4O14493 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN4O14493 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN4O14493 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN4O14493 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN4O14493 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN4O14493 TPRG1LP1-201ENST00000598702 760 ntBASIC20.18■□□□□ 0.82
CLDN4O14493 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN4O14493 AC005224.4-201ENST00000583262 1652 ntBASIC20.18■□□□□ 0.82
CLDN4O14493 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN4O14493 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN4O14493 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN4O14493 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN4O14493 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLDN4O14493 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 RARRES2P6-201ENST00000567333 442 ntBASIC20.17■□□□□ 0.82
CLDN4O14493 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN4O14493 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN4O14493 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLDN4O14493 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN4O14493 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN4O14493 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN4O14493 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLDN4O14493 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms