Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF11BO00300 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF11BO00300 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF11BO00300 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF11BO00300 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF11BO00300 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF11BO00300 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 AC079089.2-201ENST00000531211 1277 ntBASIC19.82■□□□□ 0.76
TNFRSF11BO00300 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFRSF11BO00300 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 AC026471.6-201ENST00000622954 1905 ntBASIC19.81■□□□□ 0.76
TNFRSF11BO00300 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 KRT125P-201ENST00000546827 989 ntBASIC19.81■□□□□ 0.76
TNFRSF11BO00300 AC104564.3-201ENST00000582367 638 ntBASIC19.81■□□□□ 0.76
TNFRSF11BO00300 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF11BO00300 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFRSF11BO00300 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 AL031602.1-201ENST00000633169 911 ntBASIC19.79■□□□□ 0.76
TNFRSF11BO00300 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF11BO00300 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TNFRSF11BO00300 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 OR7E47P-201ENST00000546390 1422 ntBASIC19.77■□□□□ 0.76
TNFRSF11BO00300 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF11BO00300 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms