Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
H3BM21 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3BM21 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.38■■□□□ 1.01
H3BM21 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H3BM21 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
H3BM21 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H3BM21 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.37■■□□□ 1.01
H3BM21 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
H3BM21 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
H3BM21 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.37■■□□□ 1.01
H3BM21 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H3BM21 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H3BM21 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.36■■□□□ 1.01
H3BM21 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.36■■□□□ 1.01
H3BM21 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
H3BM21 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.36■■□□□ 1.01
H3BM21 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.36■■□□□ 1.01
H3BM21 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3BM21 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
H3BM21 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.36■■□□□ 1.01
H3BM21 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3BM21 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
H3BM21 AP004607.4-201ENST00000530158 1459 ntBASIC21.35■■□□□ 1.01
H3BM21 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3BM21 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
H3BM21 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
H3BM21 AC006015.1-201ENST00000429970 570 ntBASIC21.35■■□□□ 1.01
H3BM21 AC079140.4-201ENST00000507448 529 ntBASIC21.35■■□□□ 1.01
H3BM21 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.35■■□□□ 1.01
H3BM21 AC004854.2-201ENST00000608450 1441 ntBASIC21.35■■□□□ 1.01
H3BM21 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3BM21 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
H3BM21 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
H3BM21 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
H3BM21 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.34■■□□□ 1.01
H3BM21 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.34■■□□□ 1.01
H3BM21 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
H3BM21 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
H3BM21 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.33■■□□□ 1.01
H3BM21 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.33■■□□□ 1.01
H3BM21 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.33■■□□□ 1.01
H3BM21 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.33■■□□□ 1.01
H3BM21 KRT18P61-201ENST00000585825 1298 ntBASIC21.33■■□□□ 1.01
H3BM21 AC080038.1-201ENST00000611274 1154 ntBASIC21.33■■□□□ 1.01
H3BM21 AC233723.2-201ENST00000623798 2106 ntBASIC21.33■■□□□ 1.01
H3BM21 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3BM21 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3BM21 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3BM21 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3BM21 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
H3BM21 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.32■■□□□ 1
H3BM21 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.32■■□□□ 1
H3BM21 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 AC127496.7-201ENST00000625110 1798 ntBASIC21.32■■□□□ 1
H3BM21 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.32■■□□□ 1
H3BM21 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.32■■□□□ 1
H3BM21 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H3BM21 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
H3BM21 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
H3BM21 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
H3BM21 ID1-201ENST00000376105 1233 ntBASIC21.31■■□□□ 1
H3BM21 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.31■■□□□ 1
H3BM21 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.31■■□□□ 1
H3BM21 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
H3BM21 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
H3BM21 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.31■■□□□ 1
H3BM21 AC009237.3-201ENST00000393279 1427 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms