Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00473A8K010 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LINC00473A8K010 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC00473A8K010 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC00473A8K010 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LINC00473A8K010 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC00473A8K010 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00473A8K010 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00473A8K010 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LINC00473A8K010 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC00473A8K010 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
LINC00473A8K010 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 SYT6-210ENST00000641643 1587 ntBASIC17.47■□□□□ 0.39
LINC00473A8K010 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC00473A8K010 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00473A8K010 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00473A8K010 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00473A8K010 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00473A8K010 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 AF106564.1-201ENST00000607058 2553 ntBASIC17.46■□□□□ 0.39
LINC00473A8K010 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00473A8K010 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00473A8K010 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00473A8K010 AL138724.1-201ENST00000606771 1088 ntBASIC17.46■□□□□ 0.39
LINC00473A8K010 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC00473A8K010 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00473A8K010 OXCT2P1-201ENST00000447263 1535 ntBASIC17.46■□□□□ 0.39
LINC00473A8K010 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00473A8K010 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.46■□□□□ 0.38
LINC00473A8K010 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
LINC00473A8K010 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC00473A8K010 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC00473A8K010 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00473A8K010 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC00473A8K010 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.45■□□□□ 0.38
LINC00473A8K010 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LINC00473A8K010 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00473A8K010 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LINC00473A8K010 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00473A8K010 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
LINC00473A8K010 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00473A8K010 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00473A8K010 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00473A8K010 FEM1AP4-201ENST00000443167 1987 ntBASIC17.44■□□□□ 0.38
LINC00473A8K010 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LINC00473A8K010 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00473A8K010 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00473A8K010 AC131281.2-201ENST00000520478 145 ntBASIC17.44■□□□□ 0.38
LINC00473A8K010 DUX4L19-201ENST00000557448 1267 ntBASIC17.44■□□□□ 0.38
LINC00473A8K010 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00473A8K010 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00473A8K010 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00473A8K010 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00473A8K010 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00473A8K010 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00473A8K010 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 AC136469.2-201ENST00000623944 1028 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms