Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DBI-210ENST00000542275 757 ntTSL 5 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HFM1A2PYH4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
HFM1A2PYH4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC32.03■■■□□ 2.72
HFM1A2PYH4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.03■■■□□ 2.72
HFM1A2PYH4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HFM1A2PYH4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HFM1A2PYH4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.02■■■□□ 2.72
HFM1A2PYH4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC32.01■■■□□ 2.72
HFM1A2PYH4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
HFM1A2PYH4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
HFM1A2PYH4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC32.01■■■□□ 2.72
HFM1A2PYH4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.01■■■□□ 2.72
HFM1A2PYH4 EEF1DP3-203ENST00000566025 782 ntBASIC32.01■■■□□ 2.72
HFM1A2PYH4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
HFM1A2PYH4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC32.01■■■□□ 2.72
HFM1A2PYH4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
HFM1A2PYH4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC32.01■■■□□ 2.71
HFM1A2PYH4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
HFM1A2PYH4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
HFM1A2PYH4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
HFM1A2PYH4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
HFM1A2PYH4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32■■■□□ 2.71
HFM1A2PYH4 AC104187.1-201ENST00000607510 612 ntBASIC32■■■□□ 2.71
HFM1A2PYH4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC32■■■□□ 2.71
HFM1A2PYH4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 KRT19P1-201ENST00000405746 1186 ntBASIC32■■■□□ 2.71
HFM1A2PYH4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC32■■■□□ 2.71
HFM1A2PYH4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC32■■■□□ 2.71
HFM1A2PYH4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32■■■□□ 2.71
HFM1A2PYH4 AL137784.2-201ENST00000607332 1000 ntBASIC32■■■□□ 2.71
HFM1A2PYH4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC32■■■□□ 2.71
HFM1A2PYH4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
HFM1A2PYH4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
HFM1A2PYH4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
HFM1A2PYH4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.99■■■□□ 2.71
HFM1A2PYH4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HFM1A2PYH4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HFM1A2PYH4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
HFM1A2PYH4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HFM1A2PYH4 FXN-202ENST00000396364 980 ntTSL 5 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.98■■■□□ 2.71
HFM1A2PYH4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC31.98■■■□□ 2.71
HFM1A2PYH4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HFM1A2PYH4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
HFM1A2PYH4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC31.97■■■□□ 2.71
HFM1A2PYH4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
HFM1A2PYH4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
HFM1A2PYH4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.97■■■□□ 2.71
HFM1A2PYH4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
HFM1A2PYH4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
HFM1A2PYH4 AC092053.2-201ENST00000640557 1818 ntBASIC31.96■■■□□ 2.71
HFM1A2PYH4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
HFM1A2PYH4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.96■■■□□ 2.71
HFM1A2PYH4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
HFM1A2PYH4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.96■■■□□ 2.71
HFM1A2PYH4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.96■■■□□ 2.71
HFM1A2PYH4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
HFM1A2PYH4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
HFM1A2PYH4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
HFM1A2PYH4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31.95■■■□□ 2.71
HFM1A2PYH4 AC010141.2-201ENST00000452426 721 ntBASIC31.95■■■□□ 2.71
HFM1A2PYH4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.95■■■□□ 2.7
HFM1A2PYH4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31.95■■■□□ 2.7
HFM1A2PYH4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
HFM1A2PYH4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
HFM1A2PYH4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.94■■■□□ 2.7
HFM1A2PYH4 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.94■■■□□ 2.7
HFM1A2PYH4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms