Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 AC133637.1-201ENST00000624115 1537 ntBASIC21.39■■□□□ 1.02
CCDC189A1A4V9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.39■■□□□ 1.02
CCDC189A1A4V9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCDC189A1A4V9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.38■■□□□ 1.01
CCDC189A1A4V9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC189A1A4V9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC189A1A4V9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CCDC189A1A4V9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC189A1A4V9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 pRNA.6-201ENST00000610482 90 ntBASIC21.34■■□□□ 1.01
CCDC189A1A4V9 pRNA.5-201ENST00000612139 90 ntBASIC21.34■■□□□ 1.01
CCDC189A1A4V9 pRNA.11-201ENST00000618423 90 ntBASIC21.34■■□□□ 1.01
CCDC189A1A4V9 pRNA.13-201ENST00000619112 90 ntBASIC21.34■■□□□ 1.01
CCDC189A1A4V9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC189A1A4V9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 OR2I1P-207ENST00000453522 948 ntBASIC21.33■■□□□ 1.01
CCDC189A1A4V9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC189A1A4V9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms