Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 KRT18P60-201ENST00000312876 1297 ntBASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV34A0A0B4J273 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 Z98882.1-201ENST00000622160 2253 ntBASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV34A0A0B4J273 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV34A0A0B4J273 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV34A0A0B4J273 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV34A0A0B4J273 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 KRT18P24-201ENST00000344739 1156 ntBASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV34A0A0B4J273 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.5■□□□□ 0.23
TRAV34A0A0B4J273 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 BHLHE23-202ENST00000612929 1109 ntBASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV34A0A0B4J273 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms