Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 SNX5-217ENST00000606557 1087 ntBASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 AL035685.1-201ENST00000636663 812 ntBASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-6A0A0B4J262 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 ALDH1A3-203ENST00000557963 1670 ntBASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-6A0A0B4J262 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 TSPY9P-201ENST00000440215 945 ntBASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 TSPY11P-201ENST00000442607 1045 ntBASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 ESRRAP2-201ENST00000418437 1549 ntBASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-6A0A0B4J262 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 MIR6722-201ENST00000617286 78 ntBASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms