Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV5A0A0B4J249 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV5A0A0B4J249 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV5A0A0B4J249 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 MTDHP2-201ENST00000601468 714 ntBASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV5A0A0B4J249 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 AL499627.2-201ENST00000606283 725 ntBASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV5A0A0B4J249 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV5A0A0B4J249 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms