Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 AC104564.3-201ENST00000582367 638 ntBASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DUX4L11-201ENST00000611504 1267 ntBASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DUX4L12-201ENST00000614593 1267 ntBASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DUX4L14-201ENST00000621227 1267 ntBASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 AC018445.3-201ENST00000624177 1945 ntBASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV9-1A0A075B6T8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 SMG8-203ENST00000578922 2178 ntBASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV9-1A0A075B6T8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV9-1A0A075B6T8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-1A0A075B6T8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms