Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 FAXDC2-205ENST00000517938 1203 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PTS-204ENST00000525803 625 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ABCC6P2-201ENST00000526069 590 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CIAPIN1P-201ENST00000584883 931 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC072062.1-201ENST00000617699 351 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC087163.3-201ENST00000624345 700 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC244226.1-201ENST00000631943 402 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 EPM2A-213ENST00000638778 813 ntTSL 4 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CETN3-201ENST00000283122 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PIK3R3-204ENST00000423209 1884 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC096637.2-202ENST00000421933 1846 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AL138899.1-201ENST00000415019 1999 ntTSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CACNB4-246ENST00000637309 7409 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AL139274.2-201ENST00000606274 4127 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 NOD1-201ENST00000222823 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 ASB9-202ENST00000380485 1652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 TMOD4-201ENST00000295314 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 ALMS1P1-201ENST00000428767 921 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AC009305.1-201ENST00000449780 368 ntTSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 SNORD10-201ENST00000459579 142 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AC068298.1-201ENST00000465165 161 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AC015743.1-201ENST00000524123 795 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 CHORDC2P-201ENST00000557601 1090 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 AC079331.1-201ENST00000623200 1200 ntBASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 SCNN1B-207ENST00000568085 1825 ntTSL 3 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NPIPA3F8WFD2 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
NPIPA3F8WFD2 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NPIPA3F8WFD2 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.67
NPIPA3F8WFD2 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC10.9□□□□□ -0.67
NPIPA3F8WFD2 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
NPIPA3F8WFD2 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms