Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 BPIFA3-201ENST00000375452 983 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 KRT8P40-201ENST00000392131 563 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC023141.7-201ENST00000430646 407 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC136628.2-201ENST00000505650 1142 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC108082.1-201ENST00000510857 331 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC003072.1-201ENST00000510957 612 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC064799.2-201ENST00000562681 698 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC020913.1-202ENST00000599360 467 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 LINC02255-201ENST00000619758 199 ntTSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 OR2I1P-208ENST00000641137 4948 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AL137786.1-201ENST00000553378 3030 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AC243772.2-201ENST00000428289 3543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.73□□□□□ -0.37
LMO3Q8TAP4 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 KCNMA1-289ENST00000640807 3387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 ZNF461-213ENST00000614133 1692 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 LYPD6-201ENST00000334166 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 DFNB59-202ENST00000409117 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TTC23-204ENST00000394135 2496 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 DNM1P41-201ENST00000623634 3350 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TADA2B-205ENST00000515646 3818 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC016949.1-201ENST00000432047 1413 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 C8orf44-203ENST00000519561 1835 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 ILK-215ENST00000537806 1801 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TCHP-202ENST00000405876 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 SPDYE1-201ENST00000258704 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 MED15P7-201ENST00000435410 822 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC093106.1-201ENST00000437271 352 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC012066.1-201ENST00000439252 694 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 FANCD2OS-204ENST00000450660 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 RN7SL728P-201ENST00000464718 300 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 RN7SL268P-201ENST00000491172 298 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC105424.1-201ENST00000514583 209 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC023078.3-201ENST00000527463 958 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AP005018.2-201ENST00000528464 822 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AL353997.3-201ENST00000586597 589 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC007728.3-201ENST00000602304 746 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC100835.2-201ENST00000617850 479 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 ETV1-204ENST00000403685 1603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 AC011466.4-201ENST00000623064 1614 ntBASIC12.72□□□□□ -0.37
LMO3Q8TAP4 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 POLR3C-202ENST00000369294 1590 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 DGKA-229ENST00000551156 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO3Q8TAP4 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms