Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP46A1Q9Y6A2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CYP46A1Q9Y6A2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 MIR4767-201ENST00000582827 78 ntBASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 AC026471.6-201ENST00000622954 1905 ntBASIC25.53■■□□□ 1.68
CYP46A1Q9Y6A2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 AC244015.2-201ENST00000616358 1861 ntBASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP46A1Q9Y6A2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP46A1Q9Y6A2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 AC024257.2-201ENST00000549699 147 ntBASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 AL136162.1-201ENST00000607711 1078 ntBASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP46A1Q9Y6A2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 BX842568.3-201ENST00000418104 571 ntBASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CYP46A1Q9Y6A2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 AC026310.3-201ENST00000625186 2373 ntBASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 AC008406.3-201ENST00000620001 1374 ntBASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.48■■□□□ 1.67
CYP46A1Q9Y6A2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms