Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST4Q9Y661 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST4Q9Y661 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST4Q9Y661 LINC02228-203ENST00000641970 1355 ntBASIC22.25■■□□□ 1.15
HS3ST4Q9Y661 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST4Q9Y661 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.24■■□□□ 1.15
HS3ST4Q9Y661 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 CCDC92B-201ENST00000575506 885 ntBASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 AC009237.3-201ENST00000393279 1427 ntBASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.23■■□□□ 1.15
HS3ST4Q9Y661 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 AL034346.1-201ENST00000568244 1277 ntBASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 TERF1P2-201ENST00000583350 1212 ntBASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 AC005224.4-201ENST00000583262 1652 ntBASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 AC092053.2-201ENST00000640557 1818 ntBASIC22.22■■□□□ 1.15
HS3ST4Q9Y661 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 ECEL1P1-201ENST00000373592 1742 ntBASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 AL117328.2-201ENST00000624617 1940 ntBASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST4Q9Y661 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.2■■□□□ 1.14
HS3ST4Q9Y661 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L2-201ENST00000561772 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L6-201ENST00000626483 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L1-201ENST00000627662 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L8-201ENST00000629013 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L3-201ENST00000630187 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L7-201ENST00000630678 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 DUX4L5-201ENST00000630834 1275 ntBASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST4Q9Y661 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
HS3ST4Q9Y661 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HS3ST4Q9Y661 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HS3ST4Q9Y661 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms