Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA6Q9Y5G7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA6Q9Y5G7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA6Q9Y5G7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PCDHGA6Q9Y5G7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA6Q9Y5G7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 AC007375.3-201ENST00000600936 2314 ntBASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA6Q9Y5G7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGA6Q9Y5G7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 AC068587.7-201ENST00000641602 218 ntBASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA6Q9Y5G7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA6Q9Y5G7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA6Q9Y5G7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms