Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB12Q9Y5F1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHB12Q9Y5F1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 TSPY6P-201ENST00000448518 926 ntBASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 AP001160.3-201ENST00000601484 763 ntBASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHB12Q9Y5F1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB12Q9Y5F1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 AC012676.1-201ENST00000574705 1949 ntBASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 MYCNOS-205ENST00000641950 531 ntBASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB12Q9Y5F1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 SLC29A4P1-201ENST00000398760 971 ntBASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB12Q9Y5F1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB12Q9Y5F1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB12Q9Y5F1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.3
PCDHB12Q9Y5F1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
PCDHB12Q9Y5F1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB12Q9Y5F1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 KRT18P6-201ENST00000555540 1265 ntBASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB12Q9Y5F1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms