Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 AC105233.4-201ENST00000642045 216 ntBASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB9Q9Y5E1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 AC127496.7-201ENST00000625110 1798 ntBASIC21.87■■□□□ 1.09
PCDHB9Q9Y5E1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 TERF1P2-201ENST00000583350 1212 ntBASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHB9Q9Y5E1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 AC080038.3-201ENST00000623346 1952 ntBASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 LINC00526-201ENST00000581067 1875 ntBASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 AC139530.1-201ENST00000575312 1977 ntBASIC21.85■■□□□ 1.09
PCDHB9Q9Y5E1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 AC016769.1-201ENST00000409132 1010 ntBASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 SMUG1P1-201ENST00000590640 811 ntBASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 AC012676.1-201ENST00000574705 1949 ntBASIC21.84■■□□□ 1.09
PCDHB9Q9Y5E1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 AC080038.1-201ENST00000611274 1154 ntBASIC21.83■■□□□ 1.09
PCDHB9Q9Y5E1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 OR7E47P-201ENST00000546390 1422 ntBASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB9Q9Y5E1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms