Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.18■□□□□ 0.82
RNF6Q9Y252 AC241377.3-202ENST00000626088 1088 ntBASIC20.18■□□□□ 0.82
RNF6Q9Y252 AC241585.3-202ENST00000628937 1088 ntBASIC20.18■□□□□ 0.82
RNF6Q9Y252 AC245100.8-202ENST00000629247 1058 ntBASIC20.18■□□□□ 0.82
RNF6Q9Y252 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF6Q9Y252 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF6Q9Y252 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RNF6Q9Y252 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF6Q9Y252 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF6Q9Y252 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF6Q9Y252 AC099791.1-201ENST00000416440 715 ntBASIC20.17■□□□□ 0.82
RNF6Q9Y252 AC097381.1-201ENST00000429019 1296 ntBASIC20.17■□□□□ 0.82
RNF6Q9Y252 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF6Q9Y252 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF6Q9Y252 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF6Q9Y252 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RNF6Q9Y252 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF6Q9Y252 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF6Q9Y252 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF6Q9Y252 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF6Q9Y252 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 FAM99A-202ENST00000538190 1989 ntBASIC20.15■□□□□ 0.82
RNF6Q9Y252 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF6Q9Y252 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF6Q9Y252 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF6Q9Y252 IRS3P-201ENST00000223076 1006 ntBASIC20.15■□□□□ 0.82
RNF6Q9Y252 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF6Q9Y252 AC087623.3-201ENST00000607047 1098 ntBASIC20.15■□□□□ 0.82
RNF6Q9Y252 AC136469.2-201ENST00000623944 1028 ntBASIC20.15■□□□□ 0.82
RNF6Q9Y252 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF6Q9Y252 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF6Q9Y252 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF6Q9Y252 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF6Q9Y252 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RNF6Q9Y252 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF6Q9Y252 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF6Q9Y252 AC006455.2-201ENST00000429931 906 ntBASIC20.14■□□□□ 0.81
RNF6Q9Y252 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF6Q9Y252 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF6Q9Y252 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RNF6Q9Y252 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF6Q9Y252 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF6Q9Y252 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms