Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 Z98882.1-201ENST00000622160 2253 ntBASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 AC103724.3-201ENST00000564481 992 ntBASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms