Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF556Q9HAH1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF556Q9HAH1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 Z98882.1-201ENST00000622160 2253 ntBASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF556Q9HAH1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF556Q9HAH1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ZNF556Q9HAH1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF556Q9HAH1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 AC103724.3-201ENST00000564481 992 ntBASIC19.83■□□□□ 0.77
ZNF556Q9HAH1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF556Q9HAH1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms