Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 DUX4L16-201ENST00000555130 1264 ntBASIC22.3■■□□□ 1.16
BRD9Q9H8M2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRD9Q9H8M2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 TSPY6P-201ENST00000448518 926 ntBASIC22.29■■□□□ 1.16
BRD9Q9H8M2 AP001160.3-201ENST00000601484 763 ntBASIC22.29■■□□□ 1.16
BRD9Q9H8M2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRD9Q9H8M2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRD9Q9H8M2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 SLC29A4P1-201ENST00000398760 971 ntBASIC22.27■■□□□ 1.16
BRD9Q9H8M2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 MYCNOS-205ENST00000641950 531 ntBASIC22.27■■□□□ 1.16
BRD9Q9H8M2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
BRD9Q9H8M2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.27■■□□□ 1.15
BRD9Q9H8M2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRD9Q9H8M2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 TSPY20P-201ENST00000450910 630 ntBASIC22.25■■□□□ 1.15
BRD9Q9H8M2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRD9Q9H8M2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 SLC7A5P2-201ENST00000553010 536 ntBASIC22.24■■□□□ 1.15
BRD9Q9H8M2 KRT18P6-201ENST00000555540 1265 ntBASIC22.24■■□□□ 1.15
BRD9Q9H8M2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms