Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 AC010997.5-201ENST00000609182 354 ntBASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC4Q9H5U6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZCCHC4Q9H5U6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 AC239859.2-201ENST00000444165 318 ntBASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC4Q9H5U6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 TSPY9P-201ENST00000440215 945 ntBASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 TSPY11P-201ENST00000442607 1045 ntBASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC4Q9H5U6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.83■□□□□ 0.61
ZCCHC4Q9H5U6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms