Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 TERF1P5-201ENST00000477545 1207 ntBASIC20.93■□□□□ 0.94
SPTBN4Q9H254 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTBN4Q9H254 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 TSPY7P-201ENST00000431358 1114 ntBASIC20.92■□□□□ 0.94
SPTBN4Q9H254 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 TSPY15P-201ENST00000457163 923 ntBASIC20.92■□□□□ 0.94
SPTBN4Q9H254 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.92■□□□□ 0.94
SPTBN4Q9H254 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 AC233702.5-201ENST00000584107 538 ntBASIC20.91■□□□□ 0.94
SPTBN4Q9H254 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTBN4Q9H254 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 AC069236.1-201ENST00000604339 616 ntBASIC20.9■□□□□ 0.94
SPTBN4Q9H254 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SPTBN4Q9H254 KRT18P20-201ENST00000548986 1279 ntBASIC20.9■□□□□ 0.94
SPTBN4Q9H254 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPTBN4Q9H254 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.89■□□□□ 0.94
SPTBN4Q9H254 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 RN7SL471P-201ENST00000580476 299 ntBASIC20.89■□□□□ 0.93
SPTBN4Q9H254 AL353708.3-201ENST00000610272 989 ntBASIC20.89■□□□□ 0.93
SPTBN4Q9H254 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTBN4Q9H254 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 LINC01529-204ENST00000636474 1715 ntBASIC20.88■□□□□ 0.93
SPTBN4Q9H254 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 AL590326.2-201ENST00000625139 305 ntBASIC20.88■□□□□ 0.93
SPTBN4Q9H254 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTBN4Q9H254 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 AL121894.2-201ENST00000602977 491 ntBASIC20.87■□□□□ 0.93
SPTBN4Q9H254 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTBN4Q9H254 MIR4785-201ENST00000585005 73 ntBASIC20.87■□□□□ 0.93
SPTBN4Q9H254 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPTBN4Q9H254 AC010980.2-201ENST00000587099 1412 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms