Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 AC128676.1-201ENST00000454392 318 ntBASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 AC006058.3-201ENST00000606217 1069 ntBASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
BCL11BQ9C0K0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
BCL11BQ9C0K0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
BCL11BQ9C0K0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
BCL11BQ9C0K0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BCL11BQ9C0K0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 AC097658.1-201ENST00000475555 843 ntBASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
BCL11BQ9C0K0 AC022211.4-201ENST00000625094 2161 ntBASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 BX276092.2-201ENST00000417668 665 ntBASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCL11BQ9C0K0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 AC016405.3-201ENST00000607710 860 ntBASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BCL11BQ9C0K0 AL353803.4-201ENST00000565882 1934 ntBASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 AC008694.1-202ENST00000636953 945 ntBASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
BCL11BQ9C0K0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.08
BCL11BQ9C0K0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 UNC93B4-201ENST00000505679 747 ntBASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
BCL11BQ9C0K0 DUSP8P3-201ENST00000399571 1760 ntBASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 AC069236.1-201ENST00000604339 616 ntBASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 DUSP8P5-201ENST00000422884 1815 ntBASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.06■■■□□ 2.08
BCL11BQ9C0K0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
BCL11BQ9C0K0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
BCL11BQ9C0K0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.05■■■□□ 2.08
BCL11BQ9C0K0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
BCL11BQ9C0K0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.05■■■□□ 2.08
BCL11BQ9C0K0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms