Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 AC098934.4-201ENST00000564127 592 ntBASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 AC105036.2-201ENST00000569468 176 ntBASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH11XQ9BZA7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 AC133041.1-202ENST00000642053 222 ntBASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.23■■■□□ 2.11
PCDH11XQ9BZA7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 AC013268.1-206ENST00000638368 961 ntBASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 AC112229.1-201ENST00000639295 961 ntBASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 AC066615.1-201ENST00000640911 628 ntBASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDH11XQ9BZA7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC28.21■■■□□ 2.11
PCDH11XQ9BZA7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
PCDH11XQ9BZA7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
PCDH11XQ9BZA7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PCDH11XQ9BZA7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PCDH11XQ9BZA7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCDH11XQ9BZA7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.2■■■□□ 2.1
PCDH11XQ9BZA7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH11XQ9BZA7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 EEF1DP3-203ENST00000566025 782 ntBASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 AL034346.1-201ENST00000568244 1277 ntBASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 SLC7A5P1-201ENST00000568957 537 ntBASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 CYP2T1P-201ENST00000432607 1285 ntBASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PCDH11XQ9BZA7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 OR7E47P-201ENST00000546390 1422 ntBASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDH11XQ9BZA7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDH11XQ9BZA7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 TERF1P5-201ENST00000477545 1207 ntBASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH11XQ9BZA7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PCDH11XQ9BZA7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms