Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 ID1-201ENST00000376105 1233 ntBASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 LINC00565-201ENST00000562710 2331 ntBASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP1Q9BWH6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 AC006015.1-201ENST00000429970 570 ntBASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 ECEL1P1-201ENST00000373592 1742 ntBASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 LINC00526-201ENST00000581067 1875 ntBASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RPAP1Q9BWH6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAP1Q9BWH6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RPAP1Q9BWH6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAP1Q9BWH6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RPAP1Q9BWH6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAP1Q9BWH6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAP1Q9BWH6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAP1Q9BWH6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RPAP1Q9BWH6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPAP1Q9BWH6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPAP1Q9BWH6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RPAP1Q9BWH6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 AC139530.1-201ENST00000575312 1977 ntBASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.2■■□□□ 1.78
RPAP1Q9BWH6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 RAP2CP1-201ENST00000605103 478 ntBASIC26.19■■□□□ 1.78
RPAP1Q9BWH6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RPAP1Q9BWH6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RPAP1Q9BWH6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RPAP1Q9BWH6 AC242852.2-201ENST00000615738 1807 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms