Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40CQ96S21 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40CQ96S21 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.41■□□□□ 0.38
RAB40CQ96S21 AC004687.1-201ENST00000579003 1625 ntBASIC17.41■□□□□ 0.38
RAB40CQ96S21 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 AF106564.1-201ENST00000607058 2553 ntBASIC17.41■□□□□ 0.38
RAB40CQ96S21 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40CQ96S21 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40CQ96S21 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 PVT1_1.1-201ENST00000615125 194 ntBASIC17.4■□□□□ 0.38
RAB40CQ96S21 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40CQ96S21 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40CQ96S21 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB40CQ96S21 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40CQ96S21 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40CQ96S21 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40CQ96S21 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40CQ96S21 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40CQ96S21 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40CQ96S21 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 AC104564.3-201ENST00000582367 638 ntBASIC17.38■□□□□ 0.37
RAB40CQ96S21 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RAB40CQ96S21 AL157384.1-201ENST00000445995 2473 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms