Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.56■■□□□ 1.68
NEK1Q96PY6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.56■■□□□ 1.68
NEK1Q96PY6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK1Q96PY6 FBXW4P1-201ENST00000426721 2239 ntBASIC25.56■■□□□ 1.68
NEK1Q96PY6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.56■■□□□ 1.68
NEK1Q96PY6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
NEK1Q96PY6 IGHV3-19-201ENST00000521488 291 ntBASIC25.55■■□□□ 1.68
NEK1Q96PY6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK1Q96PY6 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.55■■□□□ 1.68
NEK1Q96PY6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK1Q96PY6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
NEK1Q96PY6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK1Q96PY6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
NEK1Q96PY6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
NEK1Q96PY6 MIR638-201ENST00000385237 100 ntBASIC25.54■■□□□ 1.68
NEK1Q96PY6 MIR939-201ENST00000401314 82 ntBASIC25.54■■□□□ 1.68
NEK1Q96PY6 AF213884.3-201ENST00000563833 479 ntBASIC25.54■■□□□ 1.68
NEK1Q96PY6 AL136967.2-201ENST00000623968 743 ntBASIC25.54■■□□□ 1.68
NEK1Q96PY6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK1Q96PY6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK1Q96PY6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK1Q96PY6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NEK1Q96PY6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.53■■□□□ 1.68
NEK1Q96PY6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NEK1Q96PY6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NEK1Q96PY6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NEK1Q96PY6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
NEK1Q96PY6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NEK1Q96PY6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NEK1Q96PY6 AC010542.4-201ENST00000563151 1910 ntBASIC25.53■■□□□ 1.68
NEK1Q96PY6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
NEK1Q96PY6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.52■■□□□ 1.68
NEK1Q96PY6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.52■■□□□ 1.68
NEK1Q96PY6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.52■■□□□ 1.68
NEK1Q96PY6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK1Q96PY6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK1Q96PY6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.52■■□□□ 1.68
NEK1Q96PY6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 SUDS3P1-201ENST00000505831 966 ntBASIC25.51■■□□□ 1.67
NEK1Q96PY6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 RASA4CP-201ENST00000424092 1398 ntBASIC25.51■■□□□ 1.67
NEK1Q96PY6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK1Q96PY6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NEK1Q96PY6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK1Q96PY6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK1Q96PY6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK1Q96PY6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK1Q96PY6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.5■■□□□ 1.67
NEK1Q96PY6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.5■■□□□ 1.67
NEK1Q96PY6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.5■■□□□ 1.67
NEK1Q96PY6 SMUG1P1-201ENST00000590640 811 ntBASIC25.5■■□□□ 1.67
NEK1Q96PY6 AC026471.6-201ENST00000622954 1905 ntBASIC25.5■■□□□ 1.67
NEK1Q96PY6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 TSPY26P-201ENST00000476365 1326 ntBASIC25.49■■□□□ 1.67
NEK1Q96PY6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.49■■□□□ 1.67
NEK1Q96PY6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.49■■□□□ 1.67
NEK1Q96PY6 AC091305.1-201ENST00000479476 895 ntBASIC25.49■■□□□ 1.67
NEK1Q96PY6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.49■■□□□ 1.67
NEK1Q96PY6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.49■■□□□ 1.67
NEK1Q96PY6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
NEK1Q96PY6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK1Q96PY6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK1Q96PY6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK1Q96PY6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NEK1Q96PY6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NEK1Q96PY6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NEK1Q96PY6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.48■■□□□ 1.67
NEK1Q96PY6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NEK1Q96PY6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms