Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00479Q96M42 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 HSD17B1P1-201ENST00000590052 955 ntBASIC16.41■□□□□ 0.22
LINC00479Q96M42 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 LINC01006-201ENST00000333319 2292 ntBASIC16.41■□□□□ 0.22
LINC00479Q96M42 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00479Q96M42 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LINC00479Q96M42 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00479Q96M42 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00479Q96M42 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LINC00479Q96M42 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 AC026471.6-201ENST00000622954 1905 ntBASIC16.39■□□□□ 0.21
LINC00479Q96M42 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.39■□□□□ 0.21
LINC00479Q96M42 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC00479Q96M42 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC00479Q96M42 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC00479Q96M42 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00479Q96M42 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 AC010980.1-201ENST00000587192 1142 ntBASIC16.38■□□□□ 0.21
LINC00479Q96M42 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00479Q96M42 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00479Q96M42 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 AC005703.6-201ENST00000623265 1329 ntBASIC16.37■□□□□ 0.21
LINC00479Q96M42 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LINC00479Q96M42 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00479Q96M42 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms