Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
ZNF428Q96B54 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ZNF428Q96B54 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ZNF428Q96B54 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ZNF428Q96B54 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ZNF428Q96B54 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
ZNF428Q96B54 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.79■■■□□ 2.04
ZNF428Q96B54 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
ZNF428Q96B54 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
ZNF428Q96B54 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
ZNF428Q96B54 AC079834.2-201ENST00000609776 1949 ntBASIC27.79■■■□□ 2.04
ZNF428Q96B54 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ZNF428Q96B54 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ZNF428Q96B54 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ZNF428Q96B54 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ZNF428Q96B54 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 AL034346.1-201ENST00000568244 1277 ntBASIC27.78■■■□□ 2.04
ZNF428Q96B54 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.78■■■□□ 2.04
ZNF428Q96B54 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.77■■■□□ 2.04
ZNF428Q96B54 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
ZNF428Q96B54 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF428Q96B54 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ZNF428Q96B54 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
ZNF428Q96B54 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ZNF428Q96B54 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ZNF428Q96B54 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.76■■■□□ 2.03
ZNF428Q96B54 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.76■■■□□ 2.03
ZNF428Q96B54 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 KRT18P14-201ENST00000534205 1250 ntBASIC27.76■■■□□ 2.03
ZNF428Q96B54 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.76■■■□□ 2.03
ZNF428Q96B54 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC27.76■■■□□ 2.03
ZNF428Q96B54 AL354811.1-201ENST00000610286 706 ntBASIC27.76■■■□□ 2.03
ZNF428Q96B54 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ZNF428Q96B54 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ZNF428Q96B54 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.75■■■□□ 2.03
ZNF428Q96B54 KRT18P61-201ENST00000585825 1298 ntBASIC27.75■■■□□ 2.03
ZNF428Q96B54 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ZNF428Q96B54 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ZNF428Q96B54 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ZNF428Q96B54 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ZNF428Q96B54 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ZNF428Q96B54 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
ZNF428Q96B54 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ZNF428Q96B54 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.74■■■□□ 2.03
ZNF428Q96B54 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.74■■■□□ 2.03
ZNF428Q96B54 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ZNF428Q96B54 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ZNF428Q96B54 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ZNF428Q96B54 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 AC004911.1-201ENST00000416316 871 ntBASIC27.73■■■□□ 2.03
ZNF428Q96B54 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
ZNF428Q96B54 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ZNF428Q96B54 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ZNF428Q96B54 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
ZNF428Q96B54 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.72■■■□□ 2.03
ZNF428Q96B54 NTF6G-201ENST00000591094 616 ntBASIC27.72■■■□□ 2.03
ZNF428Q96B54 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
ZNF428Q96B54 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ZNF428Q96B54 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ZNF428Q96B54 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ZNF428Q96B54 EP400NL-214ENST00000641289 2402 ntBASIC27.71■■■□□ 2.03
ZNF428Q96B54 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 AC123595.1-201ENST00000440769 1046 ntBASIC27.71■■■□□ 2.03
ZNF428Q96B54 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms