Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 AC010542.4-201ENST00000563151 1910 ntBASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC2Q8TAQ2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 FBXW4P1-201ENST00000426721 2239 ntBASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.28■■□□□ 1.64
SMARCC2Q8TAQ2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SMARCC2Q8TAQ2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 AC068587.7-201ENST00000641602 218 ntBASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 TSPY26P-201ENST00000476365 1326 ntBASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC2Q8TAQ2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC2Q8TAQ2 AC007375.3-201ENST00000600936 2314 ntBASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 FAM99A-202ENST00000538190 1989 ntBASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 IRS3P-201ENST00000223076 1006 ntBASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 IGHV3-19-201ENST00000521488 291 ntBASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
SMARCC2Q8TAQ2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC2Q8TAQ2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC2Q8TAQ2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC2Q8TAQ2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SMARCC2Q8TAQ2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.2■■□□□ 1.63
SMARCC2Q8TAQ2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 AP005435.1-201ENST00000529293 1178 ntBASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms