Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 AC007375.3-201ENST00000600936 2314 ntBASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 NTF6G-201ENST00000591094 616 ntBASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 AC087239.1-201ENST00000622671 572 ntBASIC18.27■□□□□ 0.52
CLDND2Q8NHS1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDND2Q8NHS1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDND2Q8NHS1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 AL137784.2-201ENST00000607332 1000 ntBASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDND2Q8NHS1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 AC010141.3-201ENST00000456659 717 ntBASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLDND2Q8NHS1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 GUSBP5-202ENST00000510805 1989 ntBASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDND2Q8NHS1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 AC092437.1-201ENST00000624794 1048 ntBASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDND2Q8NHS1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms