Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC168Q8NDH2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.21■□□□□ 0.5
CCDC168Q8NDH2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.21■□□□□ 0.5
CCDC168Q8NDH2 AC068587.7-201ENST00000641602 218 ntBASIC18.21■□□□□ 0.5
CCDC168Q8NDH2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC168Q8NDH2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 KRT18P21-201ENST00000515767 1272 ntBASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 Z99916.2-201ENST00000604037 246 ntBASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC168Q8NDH2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 AC097658.1-201ENST00000475555 843 ntBASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC168Q8NDH2 AC093787.1-201ENST00000450396 207 ntBASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 BX088651.1-201ENST00000540551 451 ntBASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 SNORA78-201ENST00000459373 127 ntBASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC168Q8NDH2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 AC012618.2-201ENST00000428058 849 ntBASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 TERF1P5-201ENST00000477545 1207 ntBASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 REXO1L12P-201ENST00000622156 912 ntBASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC168Q8NDH2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms