Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 KRT18P5-201ENST00000436075 1291 ntBASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.08■□□□□ 0.97
TRIM48Q8IWZ4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM48Q8IWZ4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM48Q8IWZ4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TRIM48Q8IWZ4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM48Q8IWZ4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.08■□□□□ 0.96
TRIM48Q8IWZ4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TRIM48Q8IWZ4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 NTF6G-201ENST00000591094 616 ntBASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM48Q8IWZ4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM48Q8IWZ4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 OR7E47P-201ENST00000546390 1422 ntBASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM48Q8IWZ4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 AC009237.3-201ENST00000393279 1427 ntBASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM48Q8IWZ4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms