Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 AL136116.3-201ENST00000402907 1138 ntBASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 DUX4L19-201ENST00000557448 1267 ntBASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 AC131212.1-201ENST00000613771 668 ntBASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 AL138724.1-201ENST00000606771 1088 ntBASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 AC087239.1-201ENST00000622671 572 ntBASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 AC068587.7-201ENST00000641602 218 ntBASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00346Q8IVM7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 OR7E47P-201ENST00000546390 1422 ntBASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LINC00346Q8IVM7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00346Q8IVM7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.02■□□□□ 0.63
LINC00346Q8IVM7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 AC136469.2-201ENST00000623944 1028 ntBASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00346Q8IVM7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 SLC47A1P1-202ENST00000449666 945 ntBASIC19■□□□□ 0.63
LINC00346Q8IVM7 AC010141.3-201ENST00000456659 717 ntBASIC19■□□□□ 0.63
LINC00346Q8IVM7 AC011298.3-201ENST00000615796 283 ntBASIC19■□□□□ 0.63
LINC00346Q8IVM7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LINC00346Q8IVM7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00346Q8IVM7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms