Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 MIR3621-201ENST00000580529 85 ntBASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CRLF3Q8IUI8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 AC131281.2-201ENST00000520478 145 ntBASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CRLF3Q8IUI8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 AL356740.2-201ENST00000601559 647 ntBASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CRLF3Q8IUI8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CRLF3Q8IUI8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CRLF3Q8IUI8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CRLF3Q8IUI8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CRLF3Q8IUI8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 MIR6722-201ENST00000617286 78 ntBASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRLF3Q8IUI8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 AC073130.3-201ENST00000624389 2278 ntBASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.38■■□□□ 1.01
CRLF3Q8IUI8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 DUX4L4-201ENST00000566884 1269 ntBASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 CA15P2-201ENST00000611168 834 ntBASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.37■■□□□ 1.01
CRLF3Q8IUI8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms