Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 AL033527.3-201ENST00000566366 1196 ntBASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM1Q86UE6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 AL157384.1-201ENST00000445995 2473 ntBASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 AC012354.3-201ENST00000623734 483 ntBASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
LRRTM1Q86UE6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 BX664725.1-201ENST00000438252 379 ntBASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM1Q86UE6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRTM1Q86UE6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LRRTM1Q86UE6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRTM1Q86UE6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRTM1Q86UE6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AC079089.2-201ENST00000531211 1277 ntBASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AC092028.1-203ENST00000608262 953 ntBASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AL031602.1-201ENST00000633169 911 ntBASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM1Q86UE6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM1Q86UE6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 LINC01521-201ENST00000504184 1943 ntBASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM1Q86UE6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms