Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 AL034346.1-201ENST00000568244 1277 ntBASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 AC104187.1-201ENST00000607510 612 ntBASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.41■□□□□ 0.38
C9orf139Q6ZV77 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf139Q6ZV77 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.39■□□□□ 0.38
C9orf139Q6ZV77 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 AC006970.2-201ENST00000450065 779 ntBASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf139Q6ZV77 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 CROCCP5-201ENST00000436658 830 ntBASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 MFSD11-216ENST00000590393 1141 ntBASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C9orf139Q6ZV77 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 NCF1B-203ENST00000435988 1254 ntBASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf139Q6ZV77 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 DUSP8P5-201ENST00000422884 1815 ntBASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 OR7E47P-201ENST00000546390 1422 ntBASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf139Q6ZV77 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms