Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB11FIP1Q6WKZ4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 AC006015.1-201ENST00000429970 570 ntBASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB11FIP1Q6WKZ4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB11FIP1Q6WKZ4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 AC080038.1-201ENST00000611274 1154 ntBASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB11FIP1Q6WKZ4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB11FIP1Q6WKZ4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RAB11FIP1Q6WKZ4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB11FIP1Q6WKZ4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB11FIP1Q6WKZ4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 OR7E47P-201ENST00000546390 1422 ntBASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 AP004607.7-201ENST00000527152 1677 ntBASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RAB11FIP1Q6WKZ4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB11FIP1Q6WKZ4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB11FIP1Q6WKZ4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 LINC00526-201ENST00000581067 1875 ntBASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms