Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
KRT40Q6A162 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.98■■□□□ 1.59
KRT40Q6A162 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
KRT40Q6A162 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
KRT40Q6A162 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
KRT40Q6A162 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KRT40Q6A162 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KRT40Q6A162 OXCT2P1-201ENST00000447263 1535 ntBASIC24.97■■□□□ 1.59
KRT40Q6A162 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.97■■□□□ 1.59
KRT40Q6A162 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.97■■□□□ 1.59
KRT40Q6A162 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KRT40Q6A162 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KRT40Q6A162 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.97■■□□□ 1.59
KRT40Q6A162 IKBKGP1-201ENST00000612193 1073 ntBASIC24.97■■□□□ 1.59
KRT40Q6A162 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.97■■□□□ 1.59
KRT40Q6A162 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KRT40Q6A162 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KRT40Q6A162 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.97■■□□□ 1.59
KRT40Q6A162 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
KRT40Q6A162 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
KRT40Q6A162 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.96■■□□□ 1.59
KRT40Q6A162 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KRT40Q6A162 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
KRT40Q6A162 OR7E47P-201ENST00000546390 1422 ntBASIC24.95■■□□□ 1.59
KRT40Q6A162 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
KRT40Q6A162 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.95■■□□□ 1.58
KRT40Q6A162 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.95■■□□□ 1.58
KRT40Q6A162 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
KRT40Q6A162 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KRT40Q6A162 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.94■■□□□ 1.58
KRT40Q6A162 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
KRT40Q6A162 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
KRT40Q6A162 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.94■■□□□ 1.58
KRT40Q6A162 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.94■■□□□ 1.58
KRT40Q6A162 AC233992.3-201ENST00000607491 485 ntBASIC24.94■■□□□ 1.58
KRT40Q6A162 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 FAM99A-202ENST00000538190 1989 ntBASIC24.94■■□□□ 1.58
KRT40Q6A162 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KRT40Q6A162 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
KRT40Q6A162 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
KRT40Q6A162 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.93■■□□□ 1.58
KRT40Q6A162 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.93■■□□□ 1.58
KRT40Q6A162 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KRT40Q6A162 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.93■■□□□ 1.58
KRT40Q6A162 FBXW4P1-201ENST00000426721 2239 ntBASIC24.93■■□□□ 1.58
KRT40Q6A162 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KRT40Q6A162 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KRT40Q6A162 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KRT40Q6A162 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.92■■□□□ 1.58
KRT40Q6A162 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.92■■□□□ 1.58
KRT40Q6A162 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
KRT40Q6A162 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
KRT40Q6A162 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.91■■□□□ 1.58
KRT40Q6A162 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KRT40Q6A162 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 AC010542.4-201ENST00000563151 1910 ntBASIC24.9■■□□□ 1.58
KRT40Q6A162 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
KRT40Q6A162 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.9■■□□□ 1.58
KRT40Q6A162 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
KRT40Q6A162 AC008764.7-201ENST00000593779 1081 ntBASIC24.9■■□□□ 1.58
KRT40Q6A162 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.9■■□□□ 1.58
KRT40Q6A162 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
KRT40Q6A162 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.9■■□□□ 1.58
KRT40Q6A162 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms