Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HLA-DQA1Q5Y7H0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC133561.1-201ENST00000568600 2415 ntBASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 SMUG1P1-201ENST00000590640 811 ntBASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA1Q5Y7H0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 LINC00526-201ENST00000581067 1875 ntBASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA1Q5Y7H0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 AL034346.1-201ENST00000568244 1277 ntBASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 GUSBP5-202ENST00000510805 1989 ntBASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HLA-DQA1Q5Y7H0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQA1Q5Y7H0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC080038.3-201ENST00000623346 1952 ntBASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 MIR6084-201ENST00000622012 110 ntBASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC242852.2-201ENST00000615738 1807 ntBASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DQA1Q5Y7H0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA1Q5Y7H0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 BX005040.4-201ENST00000637145 1518 ntBASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms