Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 AC005224.4-201ENST00000583262 1652 ntBASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF17Q5VTA0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF17Q5VTA0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
PRAMEF17Q5VTA0 LINC00526-201ENST00000581067 1875 ntBASIC20.52■□□□□ 0.87
PRAMEF17Q5VTA0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 AC087742.1-201ENST00000575880 1738 ntBASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 AC079140.4-201ENST00000507448 529 ntBASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 AC137761.2-201ENST00000561729 223 ntBASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 AC145350.3-201ENST00000569033 163 ntBASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF17Q5VTA0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF17Q5VTA0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF17Q5VTA0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 AC006015.1-201ENST00000429970 570 ntBASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF17Q5VTA0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 AC009237.3-201ENST00000393279 1427 ntBASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 AC016769.1-201ENST00000409132 1010 ntBASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF17Q5VTA0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms