Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LRIF1Q5T3J3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LRIF1Q5T3J3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 OR2I1P-207ENST00000453522 948 ntBASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 AC099791.2-201ENST00000605725 427 ntBASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIF1Q5T3J3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 AF106564.1-201ENST00000607058 2553 ntBASIC20.28■□□□□ 0.84
LRIF1Q5T3J3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRIF1Q5T3J3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRIF1Q5T3J3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRIF1Q5T3J3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRIF1Q5T3J3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRIF1Q5T3J3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 KRT16P3-201ENST00000439127 1283 ntBASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 MIR3181-201ENST00000578512 73 ntBASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.26■□□□□ 0.83
LRIF1Q5T3J3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.25■□□□□ 0.83
LRIF1Q5T3J3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms