Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 AC091874.3-201ENST00000512672 1195 ntBASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
SNAPC4Q5SXM2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 AC022211.4-201ENST00000625094 2161 ntBASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC35.74■■■■□ 3.31
SNAPC4Q5SXM2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SNAPC4Q5SXM2 AC008550.1-201ENST00000511500 884 ntBASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
SNAPC4Q5SXM2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
SNAPC4Q5SXM2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC35.71■■■■□ 3.31
SNAPC4Q5SXM2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC35.71■■■■□ 3.31
SNAPC4Q5SXM2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC35.71■■■■□ 3.31
SNAPC4Q5SXM2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC35.71■■■■□ 3.31
SNAPC4Q5SXM2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 AL353803.4-201ENST00000565882 1934 ntBASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC35.7■■■■□ 3.31
SNAPC4Q5SXM2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
SNAPC4Q5SXM2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
SNAPC4Q5SXM2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
SNAPC4Q5SXM2 AC069236.1-201ENST00000604339 616 ntBASIC35.69■■■■□ 3.3
SNAPC4Q5SXM2 AC073648.6-201ENST00000641589 218 ntBASIC35.69■■■■□ 3.3
SNAPC4Q5SXM2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC35.69■■■■□ 3.3
SNAPC4Q5SXM2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
SNAPC4Q5SXM2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 AC097658.1-201ENST00000475555 843 ntBASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 LINC00543-201ENST00000567234 1845 ntBASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 UNC93B5-201ENST00000530315 699 ntBASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC35.67■■■■□ 3.3
SNAPC4Q5SXM2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 AC026366.1-201ENST00000488803 879 ntBASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
SNAPC4Q5SXM2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
SNAPC4Q5SXM2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC35.65■■■■□ 3.3
SNAPC4Q5SXM2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
SNAPC4Q5SXM2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
SNAPC4Q5SXM2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC35.64■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms